Serveur d'exploration sur l'opéra

Attention, ce site est en cours de développement !
Attention, site généré par des moyens informatiques à partir de corpus bruts.
Les informations ne sont donc pas validées.

Encoding and decoding spatio-temporal information for super-resolution microscopy.

Identifieur interne : 000204 ( Main/Exploration ); précédent : 000203; suivant : 000205

Encoding and decoding spatio-temporal information for super-resolution microscopy.

Auteurs : Luca Lanzan [Italie] ; Iván Coto Hernández [Italie] ; Marco Castello [Italie] ; Enrico Gratton [États-Unis] ; Alberto Diaspro [Italie] ; Giuseppe Vicidomini [Italie]

Source :

RBID : pubmed:25833391

English descriptors

Abstract

The challenge of increasing the spatial resolution of an optical microscope beyond the diffraction limit can be reduced to a spectroscopy task by proper manipulation of the molecular states. The nanoscale spatial distribution of the molecules inside the detection volume of a scanning microscope can be encoded within the fluorescence dynamics and decoded by resolving the signal into its dynamics components. Here we present a robust and general method to decode this information using phasor analysis. As an example of the application of this method, we optically generate spatially controlled gradients in the fluorescence lifetime by stimulated emission. Spatial resolution can be increased indefinitely by increasing the number of resolved dynamics components up to a maximum determined by the amount of noise. We demonstrate that the proposed method provides nanoscale imaging of subcellular structures, opening new routes in super-resolution microscopy based on the encoding/decoding of spatial information through manipulation of molecular dynamics.

DOI: 10.1038/ncomms7701
PubMed: 25833391


Affiliations:


Links toward previous steps (curation, corpus...)


Le document en format XML

<record>
<TEI>
<teiHeader>
<fileDesc>
<titleStmt>
<title xml:lang="en">Encoding and decoding spatio-temporal information for super-resolution microscopy.</title>
<author>
<name sortKey="Lanzan, Luca" sort="Lanzan, Luca" uniqKey="Lanzan L" first="Luca" last="Lanzan">Luca Lanzan</name>
<affiliation wicri:level="1">
<nlm:affiliation>Nanoscopy, Nanophysics Istituto Italiano di Tecnologia, via Morego 30, Genoa 16163, Italy.</nlm:affiliation>
<country xml:lang="fr">Italie</country>
<wicri:regionArea>Nanoscopy, Nanophysics Istituto Italiano di Tecnologia, via Morego 30, Genoa 16163</wicri:regionArea>
<wicri:noRegion>Genoa 16163</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Coto Hernandez, Ivan" sort="Coto Hernandez, Ivan" uniqKey="Coto Hernandez I" first="Iván" last="Coto Hernández">Iván Coto Hernández</name>
<affiliation wicri:level="1">
<nlm:affiliation>1] Nanoscopy, Nanophysics Istituto Italiano di Tecnologia, via Morego 30, Genoa 16163, Italy [2] Department of Physics, University of Genoa, via Dodecaneso 33, Genoa 16146, Italy.</nlm:affiliation>
<country xml:lang="fr">Italie</country>
<wicri:regionArea>1] Nanoscopy, Nanophysics Istituto Italiano di Tecnologia, via Morego 30, Genoa 16163, Italy [2] Department of Physics, University of Genoa, via Dodecaneso 33, Genoa 16146</wicri:regionArea>
<wicri:noRegion>Genoa 16146</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Castello, Marco" sort="Castello, Marco" uniqKey="Castello M" first="Marco" last="Castello">Marco Castello</name>
<affiliation wicri:level="1">
<nlm:affiliation>1] Nanoscopy, Nanophysics Istituto Italiano di Tecnologia, via Morego 30, Genoa 16163, Italy [2] Department of Computer Science, Bioengineering, Robotics and Systems Engineering, via Opera Pia 13, Genoa 16145, Italy.</nlm:affiliation>
<country xml:lang="fr">Italie</country>
<wicri:regionArea>1] Nanoscopy, Nanophysics Istituto Italiano di Tecnologia, via Morego 30, Genoa 16163, Italy [2] Department of Computer Science, Bioengineering, Robotics and Systems Engineering, via Opera Pia 13, Genoa 16145</wicri:regionArea>
<wicri:noRegion>Genoa 16145</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Gratton, Enrico" sort="Gratton, Enrico" uniqKey="Gratton E" first="Enrico" last="Gratton">Enrico Gratton</name>
<affiliation wicri:level="1">
<nlm:affiliation>Laboratory for Fluorescence Dynamics, Department of Biomedical Engineering, University of California, Irvine, California 92697, USA.</nlm:affiliation>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Laboratory for Fluorescence Dynamics, Department of Biomedical Engineering, University of California, Irvine, California 92697</wicri:regionArea>
<wicri:noRegion>California 92697</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Diaspro, Alberto" sort="Diaspro, Alberto" uniqKey="Diaspro A" first="Alberto" last="Diaspro">Alberto Diaspro</name>
<affiliation wicri:level="1">
<nlm:affiliation>1] Nanoscopy, Nanophysics Istituto Italiano di Tecnologia, via Morego 30, Genoa 16163, Italy [2] Department of Physics, University of Genoa, via Dodecaneso 33, Genoa 16146, Italy.</nlm:affiliation>
<country xml:lang="fr">Italie</country>
<wicri:regionArea>1] Nanoscopy, Nanophysics Istituto Italiano di Tecnologia, via Morego 30, Genoa 16163, Italy [2] Department of Physics, University of Genoa, via Dodecaneso 33, Genoa 16146</wicri:regionArea>
<wicri:noRegion>Genoa 16146</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Vicidomini, Giuseppe" sort="Vicidomini, Giuseppe" uniqKey="Vicidomini G" first="Giuseppe" last="Vicidomini">Giuseppe Vicidomini</name>
<affiliation wicri:level="1">
<nlm:affiliation>Nanoscopy, Nanophysics Istituto Italiano di Tecnologia, via Morego 30, Genoa 16163, Italy.</nlm:affiliation>
<country xml:lang="fr">Italie</country>
<wicri:regionArea>Nanoscopy, Nanophysics Istituto Italiano di Tecnologia, via Morego 30, Genoa 16163</wicri:regionArea>
<wicri:noRegion>Genoa 16163</wicri:noRegion>
</affiliation>
</author>
</titleStmt>
<publicationStmt>
<idno type="wicri:source">PubMed</idno>
<date when="2015">2015</date>
<idno type="doi">10.1038/ncomms7701</idno>
<idno type="RBID">pubmed:25833391</idno>
<idno type="pmid">25833391</idno>
<idno type="wicri:Area/PubMed/Corpus">000096</idno>
<idno type="wicri:Area/PubMed/Curation">000096</idno>
<idno type="wicri:Area/PubMed/Checkpoint">000101</idno>
<idno type="wicri:Area/Ncbi/Merge">000D30</idno>
<idno type="wicri:Area/Ncbi/Curation">000D30</idno>
<idno type="wicri:Area/Ncbi/Checkpoint">000D30</idno>
<idno type="wicri:Area/Main/Merge">000201</idno>
<idno type="wicri:Area/Main/Curation">000204</idno>
<idno type="wicri:Area/Main/Exploration">000204</idno>
</publicationStmt>
<sourceDesc>
<biblStruct>
<analytic>
<title xml:lang="en">Encoding and decoding spatio-temporal information for super-resolution microscopy.</title>
<author>
<name sortKey="Lanzan, Luca" sort="Lanzan, Luca" uniqKey="Lanzan L" first="Luca" last="Lanzan">Luca Lanzan</name>
<affiliation wicri:level="1">
<nlm:affiliation>Nanoscopy, Nanophysics Istituto Italiano di Tecnologia, via Morego 30, Genoa 16163, Italy.</nlm:affiliation>
<country xml:lang="fr">Italie</country>
<wicri:regionArea>Nanoscopy, Nanophysics Istituto Italiano di Tecnologia, via Morego 30, Genoa 16163</wicri:regionArea>
<wicri:noRegion>Genoa 16163</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Coto Hernandez, Ivan" sort="Coto Hernandez, Ivan" uniqKey="Coto Hernandez I" first="Iván" last="Coto Hernández">Iván Coto Hernández</name>
<affiliation wicri:level="1">
<nlm:affiliation>1] Nanoscopy, Nanophysics Istituto Italiano di Tecnologia, via Morego 30, Genoa 16163, Italy [2] Department of Physics, University of Genoa, via Dodecaneso 33, Genoa 16146, Italy.</nlm:affiliation>
<country xml:lang="fr">Italie</country>
<wicri:regionArea>1] Nanoscopy, Nanophysics Istituto Italiano di Tecnologia, via Morego 30, Genoa 16163, Italy [2] Department of Physics, University of Genoa, via Dodecaneso 33, Genoa 16146</wicri:regionArea>
<wicri:noRegion>Genoa 16146</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Castello, Marco" sort="Castello, Marco" uniqKey="Castello M" first="Marco" last="Castello">Marco Castello</name>
<affiliation wicri:level="1">
<nlm:affiliation>1] Nanoscopy, Nanophysics Istituto Italiano di Tecnologia, via Morego 30, Genoa 16163, Italy [2] Department of Computer Science, Bioengineering, Robotics and Systems Engineering, via Opera Pia 13, Genoa 16145, Italy.</nlm:affiliation>
<country xml:lang="fr">Italie</country>
<wicri:regionArea>1] Nanoscopy, Nanophysics Istituto Italiano di Tecnologia, via Morego 30, Genoa 16163, Italy [2] Department of Computer Science, Bioengineering, Robotics and Systems Engineering, via Opera Pia 13, Genoa 16145</wicri:regionArea>
<wicri:noRegion>Genoa 16145</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Gratton, Enrico" sort="Gratton, Enrico" uniqKey="Gratton E" first="Enrico" last="Gratton">Enrico Gratton</name>
<affiliation wicri:level="1">
<nlm:affiliation>Laboratory for Fluorescence Dynamics, Department of Biomedical Engineering, University of California, Irvine, California 92697, USA.</nlm:affiliation>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Laboratory for Fluorescence Dynamics, Department of Biomedical Engineering, University of California, Irvine, California 92697</wicri:regionArea>
<wicri:noRegion>California 92697</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Diaspro, Alberto" sort="Diaspro, Alberto" uniqKey="Diaspro A" first="Alberto" last="Diaspro">Alberto Diaspro</name>
<affiliation wicri:level="1">
<nlm:affiliation>1] Nanoscopy, Nanophysics Istituto Italiano di Tecnologia, via Morego 30, Genoa 16163, Italy [2] Department of Physics, University of Genoa, via Dodecaneso 33, Genoa 16146, Italy.</nlm:affiliation>
<country xml:lang="fr">Italie</country>
<wicri:regionArea>1] Nanoscopy, Nanophysics Istituto Italiano di Tecnologia, via Morego 30, Genoa 16163, Italy [2] Department of Physics, University of Genoa, via Dodecaneso 33, Genoa 16146</wicri:regionArea>
<wicri:noRegion>Genoa 16146</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Vicidomini, Giuseppe" sort="Vicidomini, Giuseppe" uniqKey="Vicidomini G" first="Giuseppe" last="Vicidomini">Giuseppe Vicidomini</name>
<affiliation wicri:level="1">
<nlm:affiliation>Nanoscopy, Nanophysics Istituto Italiano di Tecnologia, via Morego 30, Genoa 16163, Italy.</nlm:affiliation>
<country xml:lang="fr">Italie</country>
<wicri:regionArea>Nanoscopy, Nanophysics Istituto Italiano di Tecnologia, via Morego 30, Genoa 16163</wicri:regionArea>
<wicri:noRegion>Genoa 16163</wicri:noRegion>
</affiliation>
</author>
</analytic>
<series>
<title level="j">Nature communications</title>
<idno type="e-ISSN">2041-1723</idno>
<imprint>
<date when="2015" type="published">2015</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc>
<textClass>
<keywords scheme="KwdEn" xml:lang="en">
<term>HeLa Cells</term>
<term>Humans</term>
<term>Microscopy, Confocal (methods)</term>
<term>Microscopy, Fluorescence (methods)</term>
<term>Spatio-Temporal Analysis</term>
</keywords>
<keywords scheme="MESH" qualifier="methods" xml:lang="en">
<term>Microscopy, Confocal</term>
<term>Microscopy, Fluorescence</term>
</keywords>
<keywords scheme="MESH" xml:lang="en">
<term>HeLa Cells</term>
<term>Humans</term>
<term>Spatio-Temporal Analysis</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front>
<div type="abstract" xml:lang="en">The challenge of increasing the spatial resolution of an optical microscope beyond the diffraction limit can be reduced to a spectroscopy task by proper manipulation of the molecular states. The nanoscale spatial distribution of the molecules inside the detection volume of a scanning microscope can be encoded within the fluorescence dynamics and decoded by resolving the signal into its dynamics components. Here we present a robust and general method to decode this information using phasor analysis. As an example of the application of this method, we optically generate spatially controlled gradients in the fluorescence lifetime by stimulated emission. Spatial resolution can be increased indefinitely by increasing the number of resolved dynamics components up to a maximum determined by the amount of noise. We demonstrate that the proposed method provides nanoscale imaging of subcellular structures, opening new routes in super-resolution microscopy based on the encoding/decoding of spatial information through manipulation of molecular dynamics.</div>
</front>
</TEI>
<affiliations>
<list>
<country>
<li>Italie</li>
<li>États-Unis</li>
</country>
</list>
<tree>
<country name="Italie">
<noRegion>
<name sortKey="Lanzan, Luca" sort="Lanzan, Luca" uniqKey="Lanzan L" first="Luca" last="Lanzan">Luca Lanzan</name>
</noRegion>
<name sortKey="Castello, Marco" sort="Castello, Marco" uniqKey="Castello M" first="Marco" last="Castello">Marco Castello</name>
<name sortKey="Coto Hernandez, Ivan" sort="Coto Hernandez, Ivan" uniqKey="Coto Hernandez I" first="Iván" last="Coto Hernández">Iván Coto Hernández</name>
<name sortKey="Diaspro, Alberto" sort="Diaspro, Alberto" uniqKey="Diaspro A" first="Alberto" last="Diaspro">Alberto Diaspro</name>
<name sortKey="Vicidomini, Giuseppe" sort="Vicidomini, Giuseppe" uniqKey="Vicidomini G" first="Giuseppe" last="Vicidomini">Giuseppe Vicidomini</name>
</country>
<country name="États-Unis">
<noRegion>
<name sortKey="Gratton, Enrico" sort="Gratton, Enrico" uniqKey="Gratton E" first="Enrico" last="Gratton">Enrico Gratton</name>
</noRegion>
</country>
</tree>
</affiliations>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Wicri/Musique/explor/OperaV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000204 | SxmlIndent | more

Ou

HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 000204 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Wicri/Musique
   |area=    OperaV1
   |flux=    Main
   |étape=   Exploration
   |type=    RBID
   |clé=     pubmed:25833391
   |texte=   Encoding and decoding spatio-temporal information for super-resolution microscopy.
}}

Pour générer des pages wiki

HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i   -Sk "pubmed:25833391" \
       | HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd   \
       | NlmPubMed2Wicri -a OperaV1 

Wicri

This area was generated with Dilib version V0.6.21.
Data generation: Thu Apr 14 14:59:05 2016. Site generation: Thu Jan 4 23:09:23 2024